Research Scientist – Bioinformatics Analyst

Job Summary:

We have an exciting opportunity to join our team as a Bioinformatics Programmer.

The Center for Cancer and Blood Disorders (CCBD) at the University of Colorado/Anschutz Medical Campus is seeking a highly motivated, enthusiastic individual to manage and analyze data generated by Next-Generation DNA sequencers in conjunction with the experiments performed by our faculty. This is a great opportunity to quickly acquire new skills, develop and publish new tools and methods, analyze challenging datasets and be a co-author on multiple published studies.

Key Responsibilities:

·          Work with emerging approaches for analyzing multi-omics data analysis and integration (15%)

·         Perform robust data quality control and validation (15%)

·         Analyze various types of sequencing data analysis (e.g. single cell sequencing, RNA-seq, ChIP-seq, ATAC-seq, Hi-C-seq, bisulfite sequencing, whole-genome sequencing) (15%)

·         Work closely with bench scientists to understand and help accomplish their research goals (12%)

·         Integrate different types of genomics data and prepare concise presentations of computational results (12%)

·         Design, implement, execute standard pipelines for routine genomics data analyses, and customized pipelines for collaborative research projects (11%)

·         Perform robust data quality control and validation (10%)

·         Perform other duties (such as meta-analyses of existing GEO deposited and other data sets) as assigned by faculty collaborators (10%)

Work Location:

Hybrid – this role is eligible for a hybrid schedule of 3 days per week on campus and as needed for in-person meetings.

Why Join Us:

The Hematology/Oncology/Bone Marrow Transplant Section within the Pediatrics Department is nationally recognized for providing excellent consultation, clinical care, and surgery for children and adolescents with cancer and blood disorders. Faculty in the Section study childhood bleeding disorders, brain and blood tumors, bone marrow failure and sickle cell disease. Our renowned team of multidisciplinary experts provides thousands of children who are fighting cancer and blood disorders with world-class care and cutting-edge treatments – all while pioneering new therapies and cures through groundbreaking research.

Why work for the University?

We have AMAZING benefits and offer exceptional amounts of holiday, vacation and sick leave! The University of Colorado offers an excellent benefits package including:

• Medical: Multiple plan options
• Dental: Multiple plan options
• Additional Insurance: Disability, Life, Vision
• Retirement 401(a) Plan: Employer contributes 10% of your gross pay
• Paid Time Off: Accruals over the year (based on percentage of time)
• Vacation Days: 22/year (maximum accrual 352 hours)
• Sick Days: 15/year (unlimited maximum accrual)
• Holiday Days: 11/year
• Tuition Benefit: Employees have access to this benefit on all CU campuses
• ECO Pass: Reduced rate RTD Bus and light rail service

There are many additional perks & programs with the CU Advantage.

Qualifications:

Minimum Qualifications:

Applicants must meet minimum qualifications at the time of hire.

·         Graduation from an accredited university with a Masters in Computational Biology, System Biology, Computer Science or related field

·         Minimum of 3 years of programming language experience with Python, R, Java, Go, Bash, SQL, MySQL

·         Minimum of 3 years of tools and library experience with Git, Linux, Scikit-Learn, Numpy, Pandas, Samtools, Bedtools, Bowtie2, STAR, Nextflow, Snakemake    

Condition of Employment:

·         Must be willing and able to pass a national criminal background check

Preferred Qualifications:

·         Graduation from an accredited university with a PhD in Computational Biology, System Biology, Computer Science or related field

·         Prior experience with brain cancer disease models

·         Experience with stem cell biology and relevant assays (flow cytometric analysis and flow sorting of stem or progenitor population

·         Prior experience in chromatin biology

Knowledge, Skills and Abilities:

·         Ability to function autonomously but exercise sound judgment in seeking appropriate supervision

·         Skilled in communicating effectively and facilitating group processes

·         Ability to establish and maintain effective working relationships with researchers, and other team members

·         Comply with all standard operating procedures and quality control systems per the University of Colorado policy

·         Knowledge of Computational Biology programming languages, tools and libraries

·         Demonstrates the proficiency in computer software, equipment operation, and research technical skills

How to Apply:

For full consideration, please submit the following document(s):

1.    A letter of interest describing relevant job experiences as they relate to listed job qualifications and interest in the position

2.    Curriculum vitae / Resume

3.    Five professional references including name, address, phone number (mobile number if appropriate), and email address

Applications are accepted electronically ONLY at www.cu.edu/cu-careers.

Questions should be directed to: Paul Lopez, paul.j.lopez@cuanschutz.edu

Screening of Applications Begins:

Immediately and continues until position is filled. For best consideration, apply by December 15, 2026.

Anticipated Pay Range:

The starting salary range (or hiring range) for this position has been established as HIRING RANGE:

Master’s Degree: $88,000 to $103,000

Doctorate Degree: $94,000 to $109,000

University’s good faith and reasonable estimate of the range of possible compensation at the time of posting. This position is not eligible for overtime compensation unless it is non-exempt.

Your total compensation goes beyond the number on your paycheck. The University of Colorado provides generous leave, health plans and retirement contributions that add to your bottom line.

Total Compensation Calculator: http://www.cu.edu/node/153125

Equal Employment Opportunity Statement:

The University of Colorado (CU) is an Equal Opportunity Employer and complies with all applicable federal, state, and local laws governing nondiscrimination in employment. We are committed to creating a workplace where all individuals are treated with respect and dignity, and we encourage individuals from all backgrounds to apply, including protected veterans and individuals with disabilities.

ADA Statement:

The University will provide reasonable accommodations to applicants with disabilities throughout the employment application process. To request an accommodation pursuant to the Americans with Disabilities Act, please contact the Human Resources ADA Coordinator at hr.adacoordinator@ucdenver.edu​.

Background Check Statement:

The University of Colorado Anschutz Medical Campus is dedicated to ensuring a safe and secure environment for our faculty, staff, students and visitors. To assist in achieving that goal, we conduct background investigations for all prospective employees.

Vaccination Statement:

CU Anschutz strongly encourages vaccination against the COVID-19 virus and other vaccine preventable diseases. If you work, visit, or volunteer in healthcare facilities or clinics operated by our affiliated hospital or clinical partners or by CU Anschutz, you will be required to comply with the vaccination and medical surveillance policies of the facilities or clinics where you work, visit, or volunteer, respectively. In addition, if you work in certain research areas or perform certain safety sensitive job duties, you must enroll in the occupational health medical surveillance program.